Insertion junction: CLIP2.014627_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014627
Chromosome:chromosome 9
Location:1941400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397100 (1 of 39) IPR009003 - Peptidase S1, PA clan CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTGGCGCTGACGAGCCTGTCCAGTGTCTCCTGCTCGAAGCTGCTAAC
Internal bar code:TTTATTGAGTATGCCACCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1627
LEAP-Seq percent confirming:92.9825
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAGGGGCATGAGGGGAGT
Suggested primer 2:GAACAACTCACCGCTGGAGA