Insertion junction: CLIP2.014627_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014627
Chromosome:chromosome 9
Location:1941403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397100 (1 of 39) IPR009003 - Peptidase S1, PA clan CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCACTTGCCAGGGCGCCTTCGTGCGGCCACCTGCGACGGCCTCAAGG
Internal bar code:TTTATTGAGTATGCCACCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2131
LEAP-Seq percent confirming:89.5349
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAACTCACCGCTGGAGA
Suggested primer 2:ATAAGGGGCATGAGGGGAGT