Insertion junction: CLIP2.014630_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014630
Chromosome:chromosome 8
Location:1506644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364862 (1 of 1) PF07714//PF13185 - Protein tyrosine kinase (Pkinase_Tyr) // GAF domain (GAF_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCCAAAGCAGCATGGAGTGTAAGGCAGGGCGCATAGGGCTCGGTTA
Internal bar code:GAACTAACATCGTTTTCCTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:316
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAAAAGACCCGCCCAAA
Suggested primer 2:GTTTGCCGTTAACCCCACAC