Insertion junction: CLIP2.014636_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014636
Chromosome:chromosome 12
Location:9097608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544200 CYN20D,CYN20-4,CYN13 (1 of 2) PTHR11071//PTHR11071:SF263 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // MOCA-CYP, ISOFORM A; Cyclophilin 13 3'UTR
Cre12.g544250 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACAGCCTTGAATGCAAGTGATTGGGCCTCAGAGCAGAGTTCAGCGCT
Internal bar code:TACTTGTTATGTAAGGCGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3381
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGGGCAGAGGTAGCAA
Suggested primer 2:TGTTGCCGTACAGGTGTACC