Insertion junction: CLIP2.014639_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014639
Chromosome:chromosome 1
Location:5054492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035150 (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATTGGTCACAAAACAGACACTCTTTGCGTTCTCCTTTCCCTACTGCT
Internal bar code:TTAAATGCGTCAAGGATTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1770
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGCTCTATGTCCTGACC
Suggested primer 2:CGTGTGTGTGTGTGTGTGTC