Insertion junction: CLIP2.014642_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014642
Chromosome:chromosome 7
Location:159026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313185 (1 of 1) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGCTTAGGTCAGCGCTGCGTGAGGGCTGGTACCGTTCACAGCAACG
Internal bar code:AAATAGTGGATTTTGTGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1526
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAACAACTTGAGGGGCG
Suggested primer 2:CACCTTGAGTTCTCCCCACC