Insertion junction: CLIP2.014660_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014660
Chromosome:chromosome 8
Location:795940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800898 (1 of 2) PTHR18901//PTHR18901:SF29 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // HALOACID DEHALOGENASE-LIKE HYDROLASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTAGCCAAGAGCCATACGCTGGGGCCCCTGTGTGTATGCGGCATGGG
Internal bar code:GGATTTAGTCGTTTCAGCAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTGTTTCCCACACTCC
Suggested primer 2:GACCATTTCCTCCAGGGGTG