Insertion junction: CLIP2.014681_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014681
Chromosome:chromosome 9
Location:1212323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400900 (1 of 4) IPR012337//IPR025398 - Ribonuclease H-like domain // Domain of unknown function DUF4371 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCTTCACCAGTGACGGTGCCAACGTTATGGTTGGGAAGCACTGTGG
Internal bar code:ATGTTTACTTTACATATTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5606
LEAP-Seq percent confirming:4.87805
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:78
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTACTCCACAGGCTAGG
Suggested primer 2:GAACATATGCAGCTGTGGCG