Insertion junction: CLIP2.014682_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014682
Chromosome:chromosome 7
Location:1065861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320000 GT90-38,GT90F38 GT90 family protein 38; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATGAGTACATCACACGCTACATCGCAGCAGCGCGCAAGCACGGCTT
Internal bar code:TTTGTTATTTGTCATGTCGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1506
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCACGATGAGTTCAATC
Suggested primer 2:ATGGTTCGTAACTCGCAGCA