Insertion junction: CLIP2.014682_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014682
Chromosome:chromosome 7
Location:1065867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320000 GT90-38,GT90F38 GT90 family protein 38; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCATGTCTGGGAACAGCGCCTGTGCATAGAACAAATACAAGAGGGACC
Internal bar code:TTTGTTATTTGTCATGTCGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3026
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTTCGTAACTCGCAGCA
Suggested primer 2:GCGCCACGATGAGTTCAATC