Insertion junction: CLIP2.014688_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014688
Chromosome:chromosome 17
Location:327473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698200 MMS21 SUMO ligase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCGCTCAGCCTGAAGAACGTGAGCGAGGGAGAGGGAGAGGGCGCAGC
Internal bar code:ATTGGAGAACTTATCGTTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGATTAATGGGGTGGCA
Suggested primer 2:AGCAGGAGGAGGAAGAGGAG