Insertion junction: CLIP2.014709_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014709
Chromosome:chromosome 17
Location:2254744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713100 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCGCGTGCCGCTTCAGGCAGTCCAATCAGCCCTGGTGGGTTTGGTGC
Internal bar code:GATGGTAGTTATGTCAGAACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGATGGCTACTCCCCCTT
Suggested primer 2:ACACTCCAAGAGAAGCCGTG