Insertion junction: CLIP2.014720_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014720
Chromosome:chromosome 13
Location:4262858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592100 (1 of 1) PF00097//PF00628 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGGCCCCGCTCACCTTCCGGGATGTCCTCCAGCCCCGCGCAATAGGT
Internal bar code:TCTTTAAATTCAATGTTACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1563
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGGGTTCAGGTTGCTGC
Suggested primer 2:CCATAGCCGTCCTCGTCATC