Insertion junction: CLIP2.014724_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014724
Chromosome:chromosome 6
Location:50120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g248950 (1 of 3) K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTCCGATGCTGTCGCCTGGACGCTCTGACGCCGCAGCTGCAGCACAAG
Internal bar code:TTATTAAATCTGGAGATGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:73.0769
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCTTTGTGTGAACGCAT
Suggested primer 2:TTGACCGTGTATCGTGTGCA