Insertion junction: CLIP2.014725_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014725
Chromosome:chromosome 17
Location:6568193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745097 FAS15,FLA10 FAS1 domain containing protein;; (1 of 1) IPR016112 - Group II dsDNA virus coat/capsid protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGAGAGCCTTCTTCGGGTGCGGCGGCGCGCTACCGGATCCCTTGCT
Internal bar code:TCCCTTTTCAAGGGCAATCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1468
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTAAGTATGGTCTCGGC
Suggested primer 2:GCCTTTGTGGTCAGCACAAG