Insertion junction: CLIP2.014749_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014749
Chromosome:chromosome 3
Location:1500813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151550 (1 of 1) IPR000104//IPR029060 - Antifreeze protein, type I // PIN domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTTGGGTCGCAGGCGTGGCCTGCCCCTGCTGCAGCTGCTGCTGTTGG
Internal bar code:TATGGGTTAAACTATTCTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2574
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACCTGTCCCAACACATG
Suggested primer 2:GGGCGAGGCAAGGAGTATTT