Insertion junction: CLIP2.014773_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014773
Chromosome:chromosome 7
Location:4370663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341000 (1 of 4) IPR017956//IPR020478 - AT hook, DNA-binding motif // AT hook-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCTGTTTTTTGTCTTCTGCCCGCCTGGTTTTTAAGAGGTAGCTCGC
Internal bar code:GAGTTTTATCGGTACATGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1545
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTCTGTTTCCTTGTGG
Suggested primer 2:AGGCTTGAAAGGGATCAGCC