Insertion junction: CLIP2.014774_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014774
Chromosome:chromosome 13
Location:3490689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587550 FXL3 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGAGCGCTTTCCGGGGATAGATGCGGGTGGGAGGCGTGCGGGAACAT
Internal bar code:TTGGTGGCTCCTTCGTTGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTCGGCACACCTGCATA
Suggested primer 2:CCATTTATCACGGCAGCAGC