Insertion junction: CLIP2.014787_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014787
Chromosome:chromosome 11
Location:2149954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467741 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGACAGCCCTGCGAAGAGGCCGCGAGAGCTAGTAGCCCCAGCTGCCC
Internal bar code:TTTGTTGTTTTCACAGTTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1144
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGGATGAAGCAGACACT
Suggested primer 2:GAAAGGGATCCGAGGCTCAG