Insertion junction: CLIP2.014807_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014807
Chromosome:chromosome 3
Location:5240250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182050 LCS1 (1 of 4) K01897 - long-chain acyl-CoA synthetase (ACSL, fadD); Long-chain acyl-CoA synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCCAGATTGCAAGTGCTGCAGATTGGCGTTTCGGCCAATTGTGGCAC
Internal bar code:CTGCTCGGCATTGCGTGGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4063
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCTACAGGACCAACTG
Suggested primer 2:GGGGACAGGTGACATGTGAG