Insertion junction: CLIP2.014815_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014815
Chromosome:chromosome 4
Location:2285079
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCATGCATTACTGTAGGTACCGGCTGTTGGGCCTGCAGCAGCAGCT
Internal bar code:CTGTGAGTTCTCGGAATCTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCAGATTGGTTGTCCCTG
Suggested primer 2:GCCCACAATCCTGTTCTCCA