Insertion junction: CLIP2.014815_7

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014815
Chromosome:chromosome 6
Location:3462953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278107 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTACTCAAAGTCTTTCCTTTAAAGCTAGAAAGGGCAATAGCCTGAAGA
Internal bar code:AGCGACCGGTGGAACTTTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:365
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCAAGCTACCCCAACCTC
Suggested primer 2:ACACGGGTCATGTGGAAGTC