Insertion junction: CLIP2.014821_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014821
Chromosome:chromosome 9
Location:891225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403350 (1 of 1) IPR000357//IPR016024//IPR021133 - HEAT repeat // Armadillo-type fold // HEAT, type 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGAGCGCCGCGGAGGTGGAGCTGCGCGTCATCCCCGTCAACTGATGAC
Internal bar code:AGGACTGCGTCGGGCACGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5279
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACTCGTAACACGCGGAA
Suggested primer 2:CTGTACACCACGTGGCTGAT