Insertion junction: CLIP2.014823_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014823
Chromosome:chromosome 11
Location:4086849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481050 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGATCTCACAGCATGAACCGCACGCCAGGGCACACGCACGATGGTATG
Internal bar code:CCCGTCTTGGCGTGCCAACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1426
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTGCAGTGTCCTGTTT
Suggested primer 2:AACCGTAGCCACGTACCTTG