Insertion junction: CLIP2.014825_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014825
Chromosome:chromosome 16
Location:3004692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663876 (1 of 7) PF00415//PF13540 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Regulator of chromosome condensation (RCC1) repeat (RCC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCTCAGCAAGATCGTCTGACAACACGGAGCCCCACGCACTTCACTCT
Internal bar code:ACAACGGTGCGTTCGTCTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1729
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTACGAACCGCACTCTGT
Suggested primer 2:GCACCAAGTCAACAAGCCTG