Insertion junction: CLIP2.014836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014836
Chromosome:chromosome 1
Location:7797211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054950 intron
lncRNA_TCONS_00204659 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTAGTCCCCAACACTCGCAACTACCGGCGCAACCCCGCTGGCTCGCTC
Internal bar code:AAGAAGGGGGACACAAAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:515
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTTTGTGCACAAGCTGG
Suggested primer 2:GTGGGTGAGCATGAGTTGGA