Insertion junction: CLIP2.014838_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014838
Chromosome:chromosome 3
Location:9092060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201552 MMP8 Metalloproteinase of VMP family; (1 of 1) IPR003882//IPR008752//IPR013320 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Concanavalin A-like lectin/glucanase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAATGTAACCCCCCCCTCCACAGGTCCCGCTGCAGGAGTCCATCCACA
Internal bar code:TTCTGCGAACATTAATAGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1497
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGATGCGGTTTCAGGGAG
Suggested primer 2:CCACCTCCACTTGTGACTCC