Insertion junction: CLIP2.014844_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014844
Chromosome:chromosome 9
Location:82637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386250 SMM33 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATATGGTACTTGGCCGCAGGGTGACACGCAATTGCCGTGGCACGGTT
Internal bar code:AAATTCCGTAGTTTATCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1639
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCGTGCATTATGAAGTG
Suggested primer 2:TCCGTTGACGTAGGGAGCTA