Insertion junction: CLIP2.014896_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014896
Chromosome:chromosome 3
Location:3801595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169850 TSC1 (1 of 1) PTHR10890:SF3 - CYSTEINE--TRNA LIGASE, CYTOPLASMIC; Cysteinyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGCGACACTACCCCACGGATGGCAAGGGGCACAGTCCTACCTGTATT
Internal bar code:GGTAGATTCAATCGTCCGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1571
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACTAGCCCCTCCCAACT
Suggested primer 2:AGCACTCTTGTGGACATGGG