Insertion junction: CLIP2.014899_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014899
Chromosome:chromosome 6
Location:6681403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295100 EEP4 (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos); Endonuclease/exonuclease/phosphatase family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCAGCCCCGACTGCTCCGGCAGTAGGTAGGCGTTGGTGAGGCCGGAC
Internal bar code:TGTATTTCTCTAACGAGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1064
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGTGTCGTCCATGTCCG
Suggested primer 2:CACAATTCCACCGCCAAAGG