Insertion junction: CLIP2.014918_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014918
Chromosome:chromosome 3
Location:532061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145147 TRP8 Transient receptor potential ion channel protein; (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGATGGCGGTGCGGGAGGTGCTGCACCAGCAGCAGTCTGCATTTGAGC
Internal bar code:TTAATTTAGCGTGTAATAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1844
LEAP-Seq percent confirming:89.7959
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCACATGCATCCCTGTG
Suggested primer 2:TGAAAGTCAACGCAGCAAGC