Insertion junction: CLIP2.014920_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014920
Chromosome:chromosome 1
Location:6136370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043600 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCGCCAGCATCACCCACATGCCCAACAGCTCGGACTCGAGTGGGGCC
Internal bar code:GTGGGTATGACTAGCTATAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1868
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGACAATGATGGGGCCA
Suggested primer 2:CAAGGCGGAGTCACATCAGT