Insertion junction: CLIP2.014921_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014921
Chromosome:chromosome 15
Location:1296836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639504 (1 of 3) PF13637//PF13920 - Ankyrin repeats (many copies) (Ank_4) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGGCCACCTGGGTGTTCTGTTCATGCTGCTAGAGGAGCCGCCCAGCG
Internal bar code:TGGTCGGAGCACAGTAAAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTGTGTGTGTGTGGGG
Suggested primer 2:GGGGACGTGTGTGAAGATGT