Insertion junction: CLIP2.014924_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014924
Chromosome:chromosome 12
Location:2695851
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00077901

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGACAGCAGGCAGGGTTGGGTCGTCAGGGTTGGGTCAGGTTTGGGA
Internal bar code:AGTCGGTCATTCTCAATCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:368
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCCACCAACACACATG
Suggested primer 2:GCCAATGATGTCATTCGCCC