Insertion junction: CLIP2.014925_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014925
Chromosome:chromosome 3
Location:8251686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199800 HYD1,HYDA1 (1 of 2) 1.12.7.2 - Ferredoxin hydrogenase / Uptake hydrogenase; Iron hydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAAAGGAACTGCGGATGGCCTTAAAGTCAAGCATTTTGTGACGAGTC
Internal bar code:AACAAATGTGAGGTGATTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1105
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCTGGAAGATGCGTGTT
Suggested primer 2:ATGACCACACCCATATGGCC