Insertion junction: CLIP2.014943_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014943
Chromosome:chromosome 11
Location:1697168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGTGGGGGGTGCTGTCACCCTTACGTTTCGAGGGGATGGCGCCGCC
Internal bar code:TTCGGGGTGGGGCTGCTATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2045
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGGATCCAGACAACGTG
Suggested primer 2:ATAGGTATCAAGGGTGCGCG