Insertion junction: CLIP2.014970_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014970
Chromosome:chromosome 11
Location:4016082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480451 PHC42 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGATCATGAGCCTGGCAGGCGGCCCCGCCGAGGACTGCAGCATGGCTG
Internal bar code:TAGAAACATGGGTAATACAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:393
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCTGCTTGAAACCACC
Suggested primer 2:CCAGCCCAATCCCACCAAG