Insertion junction: CLIP2.014976_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014976
Chromosome:chromosome 7
Location:1430797
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323450 SMM24 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) 2.1.1.287 - 25S rRNA (adenine(645)-N(1))-methyltransferase / 25S rRNA m(1)A(645) methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTCCTAAGGCCGCCCCAGCCGCGGCTCCAGTCACTACATCCGCGCCG
Internal bar code:GGGTTGACGAGAATGCTTCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:884
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAGTCCTAGTCAGAGCC
Suggested primer 2:AGGGAGGTGAGGATGAGGTC