Insertion junction: CLIP2.014994_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014994
Chromosome:chromosome 6
Location:3878941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278186 (1 of 1) IPR000157//IPR011251//IPR016024 - Toll/interleukin-1 receptor homology (TIR) domain // Luciferase-like domain // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTTGGGGCTCGCGCGTGTGTGTGTGTGTGTGTGCGGACGTGTGTTT
Internal bar code:GTAAAAAACTGAAGTAAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1718
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGTAGTACTCGTCGCT
Suggested primer 2:CCCGAATGGCTTTATGCTGC