Insertion junction: CLIP2.015007_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015007
Chromosome:chromosome 3
Location:2877627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162366 (1 of 2) 1.10.3.3 - L-ascorbate oxidase / Ascorbase 3'UTR_intron
Cre03.g162400 HEATR2B,HTR2B,DNAAF5 (1 of 1) IPR011989//IPR016024//IPR021133 - Armadillo-like helical // Armadillo-type fold // HEAT, type 2; 5-Hydroxytryptamine Receptor 2B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGTGTTTTAATCCGGGGGAAAGAACAGGGGGGGGGCAGTTCGCCCA
Internal bar code:GCGCGGAAATACTCTGTATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:333
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCGTGTGTGTGTATATG
Suggested primer 2:TGTTCAGCCCCACACAAAGT