Insertion junction: CLIP2.015021_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015021
Chromosome:chromosome 16
Location:597537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692200 MMP6 (1 of 1) IPR003609//IPR008752 - PAN/Apple domain // Peptidase M11, gametolysin; Metalloproteinase of VMP family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCATAATATGTGCCGTGATACTGATATCATCTGATGTCATAATATCA
Internal bar code:GGATAGTTGCATACAGCACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1666
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACTCGGGTAAGCACGTT
Suggested primer 2:TGCTGGACGAGTTCAAGGAC