Insertion junction: CLIP2.015036_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015036
Chromosome:chromosome 16
Location:1506737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653050 (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGCCGCTGGCAGATGCGGGCAGGGGCGTCCCTGACGTGCTGCCTCCA
Internal bar code:ACGGTTAGGCTAGAAAGCAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1370
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATCGAAGCAAACCCAGT
Suggested primer 2:CGTACGGCACATATCGTGGA