Insertion junction: CLIP2.015037_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015037
Chromosome:chromosome 16
Location:797698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801882 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGCGTTTGGGCCCTGCGCGTATTCCCTGACCAGCGTGACCTGCGCCA
Internal bar code:GCCATCCGTGATTAAGATTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1968
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCAAGTCGGACGTCAGT
Suggested primer 2:AATGCCTGCTTTGCTGTGTG