Insertion junction: CLIP2.015040_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015040
Chromosome:chromosome 17
Location:2129208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711850 HTR5,HTR19,HTR30 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCCGCCACCGGCGGTGTGAAGAAGCCTCATCGCTACCGCCCCGGTAC
Internal bar code:GCCTTTACTAATACTGAATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1911
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCTCAATTCCTCCCAC
Suggested primer 2:CTTGGTGATGCCCTGGATGT