Insertion junction: CLIP2.015046_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015046
Chromosome:chromosome 8
Location:545452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359567 (1 of 44) IPR000048 - IQ motif, EF-hand binding site intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACACGCAGGTGCGGCGCGAGCTGCTGTCCGCCGGCCGCGACCT
Internal bar code:TTTACGTGGTGCTACTATTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2221
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTCGCTCCATTGCATCG
Suggested primer 2:CTTGAGAGCGTGTGGACACT