Insertion junction: CLIP2.015079_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015079
Chromosome:chromosome 12
Location:6365473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537150 (1 of 20) IPR008972 - Cupredoxin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCGCGCCCAGGAACCTGCGGCATGCATGGGGTTGGAGATGATGATT
Internal bar code:GTCTTAATTCGAACTGTAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCTATGTCCGCACACGTACG
Suggested primer 2:TACATGCGTGCACCTGTTCT