Insertion junction: CLIP2.015087_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015087
Chromosome:chromosome 3
Location:5606507
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185750 (1 of 1) IPR003613//IPR013083 - U box domain // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCGTTGTGTGTCATGTGTGTTTGTGAACGGGGTGAATGTGTTTGCAC
Internal bar code:GGTGAGTAAGATATCTGTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:837
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAATGTCCGCACTCACTG
Suggested primer 2:CCCCTTCCTTTCCAGCTGAG