Insertion junction: CLIP2.015106_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015106
Chromosome:chromosome 6
Location:3022894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274550 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCGGACCGGGCGCGGAGGACGGGGTGAGTGAGGCGGGGGCGTGCGG
Internal bar code:GTATCATTCTTAACATTTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2136
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGGAGAGAGCGCATTGG
Suggested primer 2:GAAGGGGACACAGGACACAG