Insertion junction: CLIP2.015109_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015109
Chromosome:chromosome 16
Location:2104948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657700 (1 of 2) PF13661 - 2OG-Fe(II) oxygenase superfamily (2OG-FeII_Oxy_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGTTGTGCACGTGTCTGGGTTGTGCAGCCTGCACACATGCTCGAGAG
Internal bar code:AGGATTTTTAATACATGCCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1423
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCACACAATCCTCCAAGCCT
Suggested primer 2:TGTCCTTAGCTAGGTGGGCT