Insertion junction: CLIP2.015110_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015110
Chromosome:chromosome 9
Location:520407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g748697 (1 of 2) PTHR31362//PTHR31362:SF0 - FAMILY NOT NAMED // PROTEIN E03H4.4-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGTAAATGGCTGGGCCAACTCACGGTAAGGGTGTGGGAGTCCGTCGAC
Internal bar code:TTGATATCGGACCTACGCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1750
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACGCATACAGCACTCA
Suggested primer 2:CGACTCGCATGCTTGACTTG